libcp2k.h

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/*----------------------------------------------------------------------------*/
/*  CP2K: A general program to perform molecular dynamics simulations         */
/*  Copyright 2000-2024 CP2K developers group <https://cp2k.org>              */
/*                                                                            */
/*  SPDX-License-Identifier: GPL-2.0-or-later                                 */
/*----------------------------------------------------------------------------*/
 
#include <stdbool.h>
 
/*******************************************************************************
 * \brief Definitions for the functions exported in libcp2k.F
 * \author Mohammad Hossein Bani-Hashemian
 ******************************************************************************/
 
#ifndef LIBCP2K_H
#define LIBCP2K_H
 
#ifdef __cplusplus
extern "C" {
#endif
 
typedef int force_env_t;
 
/*******************************************************************************
 * \brief Get the CP2K version string
 * \param version_str The buffer to write the version string into
 * \param str_length The size of the buffer (must be large enough)
 ******************************************************************************/
void cp2k_get_version(char *version_str, int str_length);
 
/*******************************************************************************
 * \brief Initialize CP2K and MPI
 * \warning You are supposed to call cp2k_finalize() before exiting the program.
 ******************************************************************************/
void cp2k_init();
 
/*******************************************************************************
 * \brief Initialize CP2K without initializing MPI
 * \warning You are supposed to call cp2k_finalize() before exiting the program.
 ******************************************************************************/
void cp2k_init_without_mpi();
 
/*******************************************************************************
 * \brief Finalize CP2K and MPI
 ******************************************************************************/
void cp2k_finalize();
 
/*******************************************************************************
 * \brief Finalize CP2K and without finalizing MPI
 ******************************************************************************/
void cp2k_finalize_without_mpi();
 
/*******************************************************************************
 * \brief Create a new force environment
 * \param new_force_env the created force environment
 * \param input_file_path Path to a CP2K input file
 * \param output_file_path Path to a file where CP2K is going to append its
 *                         output (created if non-existent)
 * \warning You are supposed to call cp2k_destroy_force_env() to cleanup,
 *          before cp2k_finalize().
 ******************************************************************************/
void cp2k_create_force_env(force_env_t *new_force_env,
                           const char *input_file_path,
                           const char *output_file_path);
 
/*******************************************************************************
 * \brief Create a new force environment (custom managed MPI)
 * \param new_force_env the created force environment
 * \param input_file_path Path to a CP2K input file
 * \param output_file_path Path to a file where CP2K is will write its output.
 *                         Will be created if not existent, otherwise appended.
 * \param mpi_comm Fortran MPI communicator if MPI is not managed by CP2K
 * \warning You are supposed to call cp2k_destroy_force_env() to cleanup,
 *          before cp2k_finalize().
 ******************************************************************************/
void cp2k_create_force_env_comm(force_env_t *new_force_env,
                                const char *input_file_path,
                                const char *output_file_path, int mpi_comm);
 
/*******************************************************************************
 * \brief Destroy/cleanup a force environment
 * \param force_env the force environment
 ******************************************************************************/
void cp2k_destroy_force_env(force_env_t force_env);
 
/*******************************************************************************
 * \brief Set positions of the particles
 * \param force_env the force environment
 * \param new_pos Array containing the new positions of the particles
 * \param n_el Size of the new_pos array
 ******************************************************************************/
void cp2k_set_positions(force_env_t force_env, const double *new_pos, int n_el);
 
/*******************************************************************************
 * \brief Set velocity of the particles
 * \param force_env the force environment
 * \param new_vel Array containing the new velocities of the particles
 * \param n_el Size of the new_vel array
 ******************************************************************************/
void cp2k_set_velocities(force_env_t force_env, const double *new_vel,
                         int n_el);
 
/*******************************************************************************
 * \brief Set the size of the cell
 * \param force_env the force environment
 * \param new_cell Array containing the new cell
 ******************************************************************************/
void cp2k_set_cell(force_env_t force_env, const double *new_cell);
 
/*******************************************************************************
 * \brief Get an arbitrary result as 1D array from CP2K
 * \param force_env the force environment
 * \param description The string tag of the result
 * \param results Pre-allocated array
 * \param n_el size of the results array
 ******************************************************************************/
void cp2k_get_result(force_env_t force_env, const char *description,
                     double *result, int n_el);
 
/*******************************************************************************
 * \brief Get the number of atoms
 * \param force_env the force environment
 * \param natom The number of atoms
 ******************************************************************************/
void cp2k_get_natom(force_env_t force_env, int *natom);
 
/*******************************************************************************
 * \brief Get the number of particles
 * \param force_env the force environment
 * \param nparticle The number of particles
 ******************************************************************************/
void cp2k_get_nparticle(force_env_t force_env, int *nparticle);
 
/*******************************************************************************
 * \brief Get the positions of the particles
 * \param force_env the force environment
 * \param pos Pre-allocated array of at least 3*nparticle elements.
 *            Use cp2k_get_nparticle() to get the number of particles.
 * \param n_el Size of the force array
 ******************************************************************************/
void cp2k_get_positions(force_env_t force_env, double *pos, int n_el);
 
/*******************************************************************************
 * \brief Get the forces for the particles
 * \param force_env the force environment
 * \param force Pre-allocated array of at least 3*nparticle elements.
 *              Use cp2k_get_nparticle() to get the number of particles.
 * \param n_el Size of the force array
 ******************************************************************************/
void cp2k_get_forces(force_env_t force_env, double *force, int n_el);
 
/*******************************************************************************
 * \brief Get the potential energy of the system
 * \param force_env the force environment
 * \param e_pot The potential energy
 ******************************************************************************/
void cp2k_get_potential_energy(force_env_t force_env, double *e_pot);
 
/*******************************************************************************
 * \brief Get the size of the cell
 * \param force_env the force environment
 * \param cell Array containing the cell
 ******************************************************************************/
void cp2k_get_cell(force_env_t force_env, const double *cell);
 
/*******************************************************************************
 * \brief Get the size of the qmmm cell
 * \param force_env the force environment
 * \param cell Array containing the qmmm cell
 ******************************************************************************/
void cp2k_get_qmmm_cell(force_env_t force_env, const double *cell);
 
/*******************************************************************************
 * \brief Calculate energy and forces of the system
 * \param force_env the force environment
 ******************************************************************************/
void cp2k_calc_energy_force(force_env_t force_env);
 
/*******************************************************************************
 * \brief Calculate only the energy of the system
 * \param force_env the force environment
 ******************************************************************************/
void cp2k_calc_energy(force_env_t force_env);
 
/*******************************************************************************
 * \brief Make a CP2K run with the given input file
 * \param input_file_path Path to a CP2K input file
 * \param output_file_path Path to a file where CP2K is going to append its
 *                         output (created if non-existent)
 ******************************************************************************/
void cp2k_run_input(const char *input_file_path, const char *output_file_path);
 
/*******************************************************************************
 * \brief Make a CP2K run with the given input file (custom managed MPI)
 * \param input_file_path Path to a CP2K input file
 * \param output_file_path Path to a file where CP2K is going to append its
 *                         output (created if non-existent)
 * \param mpi_comm Fortran MPI communicator if MPI is not managed by CP2K
 ******************************************************************************/
void cp2k_run_input_comm(const char *input_file_path,
                         const char *output_file_path, int mpi_comm);
 
/*******************************************************************************
 * \brief Transport parameters read from a CP2K input file.
 *        This definition matches the respective type definition in the
 *        transport_env_types module
 ******************************************************************************/
typedef struct {
  int n_occ;
  int n_atoms;
  double energy_diff;
  double evoltfactor;
  double e_charge;
  double boltzmann;
  double h_bar;
  int iscf;
  int method;
  int qt_formalism;
  int injection_method;
  int rlaxis_integration_method;
  int linear_solver;
  int matrixinv_method;
  int transport_neutral;
  int num_pole;
  int ordering;
  int row_ordering;
  int verbosity;
  int pexsi_np_symb_fact;
  int n_kpoint;
  int num_interval;
  int num_contacts;
  int stride_contacts;
  int tasks_per_energy_point;
  int tasks_per_pole;
  int gpus_per_point;
  int n_points_beyn;
  int ncrc_beyn;
  int tasks_per_integration_point;
  int n_points_inv;
  int cutout[2];
  double colzero_threshold;
  double eps_limit;
  double eps_limit_cc;
  double eps_decay;
  double eps_singularity_curvatures;
  double eps_mu;
  double eps_eigval_degen;
  double eps_fermi;
  double energy_interval;
  double min_interval;
  double temperature;
  double dens_mixing;
  double n_rand_beyn;
  double n_rand_cc_beyn;
  double svd_cutoff;
  int *contacts_data;
  int *nsgf;
  double *zeff;
  bool obc_equilibrium;
  bool extra_scf;
} cp2k_transport_parameters;
 
/*******************************************************************************
 * \brief CP2K's C-interoperable CSR matrix
 *        This definition matches the respective type definition in the
 *        transport_env_types module
 ******************************************************************************/
typedef struct {
  int nrows_total;
  int ncols_total;
  int nze_total;
  int nze_local;
  int nrows_local;
  int data_type;
  int first_row;
  int *rowptr_local;
  int *colind_local;
  int *nzerow_local;
  double *nzvals_local;
} cp2k_csr_interop_type;
 
/*******************************************************************************
 * \brief Function pointer type for the externally evaluated density matrix
 *        Function pointer type pointing to a C routine that takes the S and H
 *        matrices as input and outputs a P matrix.
 *
 * Function definition example:
 * \code{.c}
 * void c_scf_method(
 *     cp2k_transport_parameters cp2k_transport_params,
 *     cp2k_csr_interop_type S,
 *     cp2k_csr_interop_type KS,
 *     cp2k_csr_interop_type* P,
 *     cp2k_csr_interop_type* PImag
 *     );
 * \endcode
 * \sa cp2k_transport_parameters, cp2k_csr_interop_type
 ******************************************************************************/
typedef void (*ext_method_callback_f_ptr)(
    cp2k_transport_parameters, // Transport parameters
    cp2k_csr_interop_type,     // S-Matrix
    cp2k_csr_interop_type,     // H-Matrix
    cp2k_csr_interop_type *,   // P-Matrix
    cp2k_csr_interop_type *    // PImag-Matrix
);
 
/*******************************************************************************
 * \brief Set the function callback for the externally evaluated density matrix
 ******************************************************************************/
void cp2k_transport_set_callback(force_env_t force_env,
                                 ext_method_callback_f_ptr func);
 
/*******************************************************************************
 * \brief Get the number of molecular orbitals in the active space
 * \param force_env the force environment
 * \returns The number of elements or -1 if unavailable
 ******************************************************************************/
int cp2k_active_space_get_mo_count(force_env_t force_env);
 
/*******************************************************************************
 * \brief Get the Fock submatrix for the active space
 * \param force_env the force environment
 * \param buf Pre-allocated array of at least mo_count^2 elements.
 *            Use `cp2k_active_space_get_mo_count()` to get the number of
 *            molecular orbitals.
 * \param buf_len Size of the buf array
 * \returns The number of elements written to buf or -1 if unavailable
 ******************************************************************************/
long int cp2k_active_space_get_fock_sub(force_env_t force_env, double *buf,
                                        long int buf_len);
 
/*******************************************************************************
 * \brief Get the number of non-zero elements in the ERI matrix
 * \param force_env the force environment
 * \returns The number of elements or -1 if unavailable
 ******************************************************************************/
long int cp2k_active_space_get_eri_nze_count(force_env_t force_env);
 
/*******************************************************************************
 * \brief Get the non-zero elements of the ERI matrix
 *        The buf_coords will contain the coordinates in the format
 *        `[i1, j1, k1, l1, i2, j2, k2, l2, ... ]`.
 *
 * \param force_env the force environment
 * \param buf_coords Pre-allocated array of at least 4*nze_count elements.
 *                   Use `cp2k_active_space_get_eri_nze_count()` to get the
 *                   number of non-zero elements.
 * \param buf_coords_len Size of the buf_coords array
 * \param buf_values Pre-allocated array of at least nze_count elements.
 *                   Use `cp2k_active_space_get_eri_nze_count()` to get the
 *                   number of non-zero elements.
 * \param buf_values_len Size of the buf_values array
 * \returns The number of elements written to buf_values or -1 if unavailable
 ******************************************************************************/
int cp2k_active_space_get_eri(force_env_t force_env, int *buf_coords,
                              long int buf_coords_len, double *buf_values,
                              long int buf_values_len);
 
#ifdef __cplusplus
}
#endif
 
#endif