qmmm_force.F

Go to the documentation of this file.

!--------------------------------------------------------------------------------------------------!
!   CP2K: A general program to perform molecular dynamics simulations                              !
!   Copyright 2000-2024 CP2K developers group <https://cp2k.org>                                   !
!                                                                                                  !
!   SPDX-License-Identifier: GPL-2.0-or-later                                                      !
!--------------------------------------------------------------------------------------------------!
 
! **************************************************************************************************
!> \brief Calculates QM/MM energy and forces
!> \par History
!>      2015 Factored out of force_env_methods.F
!> \author Ole Schuett
! **************************************************************************************************
MODULE qmmm_force
   USE cell_types,                      ONLY: cell_type
   USE cp_log_handling,                 ONLY: cp_get_default_logger,&
                                              cp_logger_get_default_io_unit,&
                                              cp_logger_type
   USE cp_output_handling,              ONLY: cp_iter_string,&
                                              cp_p_file,&
                                              cp_print_key_finished_output,&
                                              cp_print_key_should_output,&
                                              cp_print_key_unit_nr
   USE cp_result_methods,               ONLY: cp_results_erase,&
                                              get_results,&
                                              put_results
   USE cp_result_types,                 ONLY: cp_result_type
   USE cp_subsys_types,                 ONLY: cp_subsys_get,&
                                              cp_subsys_type
   USE fist_energy_types,               ONLY: fist_energy_type
   USE fist_environment_types,          ONLY: fist_env_get
   USE fist_force,                      ONLY: fist_calc_energy_force
   USE input_section_types,             ONLY: section_vals_get_subs_vals,&
                                              section_vals_type
   USE kinds,                           ONLY: default_string_length,&
                                              dp
   USE particle_types,                  ONLY: particle_type
   USE physcon,                         ONLY: debye
   USE qmmm_gpw_energy,                 ONLY: qmmm_el_coupling
   USE qmmm_gpw_forces,                 ONLY: qmmm_forces
   USE qmmm_links_methods,              ONLY: qmmm_added_chrg_coord,&
                                              qmmm_added_chrg_forces,&
                                              qmmm_link_imomm_coord,&
                                              qmmm_link_imomm_forces
   USE qmmm_types,                      ONLY: qmmm_env_type
   USE qmmm_types_low,                  ONLY: qmmm_links_type
   USE qmmm_util,                       ONLY: apply_qmmm_translate,&
                                              apply_qmmm_walls
   USE qs_energy_types,                 ONLY: qs_energy_type
   USE qs_environment_types,            ONLY: get_qs_env
   USE qs_force,                        ONLY: qs_calc_energy_force
   USE qs_ks_qmmm_methods,              ONLY: ks_qmmm_env_rebuild
#include "./base/base_uses.f90"
 
   IMPLICIT NONE
 
   PRIVATE
 
   CHARACTER(len=*), PARAMETER, PRIVATE :: moduleN = 'qmmm_force'
 
   PUBLIC :: qmmm_calc_energy_force
 
CONTAINS
 
! **************************************************************************************************
!> \brief calculates the qm/mm energy and forces
!> \param qmmm_env ...
!> \param calc_force if also the forces should be calculated
!> \param consistent_energies ...
!> \param linres ...
!> \par History
!>      05.2004 created [fawzi]
!> \author Fawzi Mohamed
! **************************************************************************************************
   SUBROUTINE qmmm_calc_energy_force(qmmm_env, calc_force, consistent_energies, linres)
      TYPE(qmmm_env_type), POINTER                       :: qmmm_env
      LOGICAL, INTENT(IN)                                :: calc_force, consistent_energies, linres
 
      CHARACTER(LEN=default_string_length)               :: description, iter
      INTEGER                                            :: ip, j, nres, output_unit
      INTEGER, DIMENSION(:), POINTER                     :: qm_atom_index
      LOGICAL                                            :: check, qmmm_added_chrg, qmmm_link, &
                                                            qmmm_link_imomm
      REAL(kind=dp)                                      :: energy_mm, energy_qm
      REAL(kind=dp), DIMENSION(3)                        :: dip_mm, dip_qm, dip_qmmm, max_coord, &
                                                            min_coord
      TYPE(cell_type), POINTER                           :: mm_cell, qm_cell
      TYPE(cp_logger_type), POINTER                      :: logger
      TYPE(cp_result_type), POINTER                      :: results_mm, results_qm, results_qmmm
      TYPE(cp_subsys_type), POINTER                      :: subsys, subsys_mm, subsys_qm
      TYPE(fist_energy_type), POINTER                    :: fist_energy
      TYPE(particle_type), DIMENSION(:), POINTER         :: particles_mm, particles_qm
      TYPE(qmmm_links_type), POINTER                     :: qmmm_links
      TYPE(qs_energy_type), POINTER                      :: qs_energy
      TYPE(section_vals_type), POINTER                   :: force_env_section, print_key
 
      min_coord = huge(0.0_dp)
      max_coord = -huge(0.0_dp)
      qmmm_link = .false.
      qmmm_link_imomm = .false.
      qmmm_added_chrg = .false.
      logger => cp_get_default_logger()
      output_unit = cp_logger_get_default_io_unit(logger)
      NULLIFY (subsys_mm, subsys_qm, subsys, qm_atom_index, particles_mm, particles_qm, qm_cell, mm_cell)
      NULLIFY (force_env_section, print_key, results_qmmm, results_qm, results_mm)
 
      CALL get_qs_env(qmmm_env%qs_env, input=force_env_section)
      print_key => section_vals_get_subs_vals(force_env_section, "QMMM%PRINT%DIPOLE")
 
      cpassert(ASSOCIATED(qmmm_env))
 
      CALL apply_qmmm_translate(qmmm_env)
 
      CALL fist_env_get(qmmm_env%fist_env, cell=mm_cell, subsys=subsys_mm)
      CALL get_qs_env(qmmm_env%qs_env, cell=qm_cell, cp_subsys=subsys_qm)
      qm_atom_index => qmmm_env%qm%qm_atom_index
      qmmm_link = qmmm_env%qm%qmmm_link
      qmmm_links => qmmm_env%qm%qmmm_links
      qmmm_added_chrg = (qmmm_env%qm%move_mm_charges .OR. qmmm_env%qm%add_mm_charges)
      IF (qmmm_link) THEN
         cpassert(ASSOCIATED(qmmm_links))
         IF (ASSOCIATED(qmmm_links%imomm)) qmmm_link_imomm = (SIZE(qmmm_links%imomm) /= 0)
      END IF
      cpassert(ASSOCIATED(qm_atom_index))
 
      particles_mm => subsys_mm%particles%els
      particles_qm => subsys_qm%particles%els
 
      DO j = 1, 3
         IF (qm_cell%perd(j) == 1) cycle
         DO ip = 1, SIZE(particles_qm)
            check = (dot_product(qm_cell%h_inv(j, :), particles_qm(ip)%r) >= 0.0) .AND. &
                    (dot_product(qm_cell%h_inv(j, :), particles_qm(ip)%r) <= 1.0)
            IF (output_unit > 0 .AND. .NOT. check) THEN
               WRITE (unit=output_unit, fmt='("ip, j, pos, lat_pos ",2I6,6F12.5)') ip, j, &
                  particles_qm(ip)%r, dot_product(qm_cell%h_inv(j, :), particles_qm(ip)%r)
            END IF
            IF (.NOT. check) &
               CALL cp_abort(__location__, &
                             "QM/MM QM atoms must be fully contained in the same image of the QM box "// &
                             "- No wrapping of coordinates is allowed! ")
         END DO
      END DO
 
      ! If present QM/MM links (just IMOMM) correct the position of the qm-link atom
      IF (qmmm_link_imomm) CALL qmmm_link_imomm_coord(qmmm_links, particles_qm, qm_atom_index)
 
      ! If add charges get their position NOW!
      IF (qmmm_added_chrg) CALL qmmm_added_chrg_coord(qmmm_env%qm, particles_mm)
 
      ! Initialize ks_qmmm_env
      CALL ks_qmmm_env_rebuild(qs_env=qmmm_env%qs_env, qmmm_env=qmmm_env%qm)
 
      ! Compute the short range QM/MM Electrostatic Potential
      CALL qmmm_el_coupling(qs_env=qmmm_env%qs_env, &
                            qmmm_env=qmmm_env%qm, &
                            mm_particles=particles_mm, &
                            mm_cell=mm_cell)
 
      ! Fist
      CALL fist_calc_energy_force(qmmm_env%fist_env)
 
      ! Print Out information on fist energy calculation...
      CALL fist_env_get(qmmm_env%fist_env, thermo=fist_energy)
      energy_mm = fist_energy%pot
      CALL cp_subsys_get(subsys_mm, results=results_mm)
 
      ! QS
      CALL qs_calc_energy_force(qmmm_env%qs_env, calc_force, consistent_energies, linres)
 
      ! QM/MM Interaction Potential forces
      CALL qmmm_forces(qmmm_env%qs_env, &
                       qmmm_env%qm, particles_mm, &
                       mm_cell=mm_cell, &
                       calc_force=calc_force)
 
      ! Forces of quadratic wall on QM atoms
      CALL apply_qmmm_walls(qmmm_env)
 
      ! Print Out information on QS energy calculation...
      CALL get_qs_env(qmmm_env%qs_env, energy=qs_energy)
      energy_qm = qs_energy%total
      CALL cp_subsys_get(subsys_qm, results=results_qm)
 
      !TODO: is really results_qm == results_qmmm ???
      CALL cp_subsys_get(subsys_qm, results=results_qmmm)
 
      IF (calc_force) THEN
         ! If present QM/MM links (just IMOMM) correct the position of the qm-link atom
         IF (qmmm_link_imomm) CALL qmmm_link_imomm_forces(qmmm_links, particles_qm, qm_atom_index)
         particles_mm => subsys_mm%particles%els
         DO ip = 1, SIZE(qm_atom_index)
            particles_mm(qm_atom_index(ip))%f = particles_mm(qm_atom_index(ip))%f + particles_qm(ip)%f
         END DO
         ! If add charges get rid of their derivatives right NOW!
         IF (qmmm_added_chrg) CALL qmmm_added_chrg_forces(qmmm_env%qm, particles_mm)
      END IF
 
      ! Handle some output
      output_unit = cp_print_key_unit_nr(logger, force_env_section, "QMMM%PRINT%DERIVATIVES", &
                                         extension=".Log")
      IF (output_unit > 0) THEN
         WRITE (unit=output_unit, fmt='(/1X,A,F15.9)') "Energy after QMMM calculation: ", energy_qm
         IF (calc_force) THEN
            WRITE (unit=output_unit, fmt='(/1X,A)') "Derivatives on all atoms after QMMM calculation: "
            DO ip = 1, SIZE(particles_mm)
               WRITE (unit=output_unit, fmt='(1X,3F15.9)') particles_mm(ip)%f
            END DO
         END IF
      END IF
      CALL cp_print_key_finished_output(output_unit, logger, force_env_section, &
                                        "QMMM%PRINT%DERIVATIVES")
 
      ! Dipole
      print_key => section_vals_get_subs_vals(force_env_section, "QMMM%PRINT%DIPOLE")
      IF (btest(cp_print_key_should_output(logger%iter_info, print_key), &
                cp_p_file)) THEN
         description = '[DIPOLE]'
         CALL get_results(results=results_qm, description=description, n_rep=nres)
         cpassert(nres <= 1)
         CALL get_results(results=results_mm, description=description, n_rep=nres)
         cpassert(nres <= 1)
         CALL get_results(results=results_qm, description=description, values=dip_qm)
         CALL get_results(results=results_mm, description=description, values=dip_mm)
         dip_qmmm = dip_qm + dip_mm
         CALL cp_results_erase(results=results_qmmm, description=description)
         CALL put_results(results=results_qmmm, description=description, values=dip_qmmm)
 
         output_unit = cp_print_key_unit_nr(logger, force_env_section, "QMMM%PRINT%DIPOLE", &
                                            extension=".Dipole")
         IF (output_unit > 0) THEN
            WRITE (unit=output_unit, fmt="(A)") "QMMM TOTAL DIPOLE"
            WRITE (unit=output_unit, fmt="(A,T31,A,T88,A)") &
               "# iter_level", "dipole(x,y,z)[atomic units]", &
               "dipole(x,y,z)[debye]"
            iter = cp_iter_string(logger%iter_info)
            WRITE (unit=output_unit, fmt="(a,6(es18.8))") &
               iter(1:15), dip_qmmm, dip_qmmm*debye
         END IF
      END IF
 
   END SUBROUTINE qmmm_calc_energy_force
 
END MODULE qmmm_force