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module | topology |
| Control for reading in different topologies and coordinates.
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subroutine, public | topology::topology_control (atomic_kind_set, particle_set, molecule_kind_set, molecule_set, colvar_p, gci, root_section, para_env, qmmm, qmmm_env, force_env_section, subsys_section, use_motion_section, exclusions, elkind) |
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subroutine, public | topology::connectivity_control (topology, para_env, qmmm, qmmm_env, subsys_section, force_env_section) |
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- If reading in from external file, make sure its there first
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